This describes how to run mutliple Pecube Simulations sequentially on the ESD_Test_Cluster.

You need to prepare:

  • A Base directory that contains the pecube executable and your simulation directories 
    (Usually something like /esd/esd/data/user/model_runs/pecube/)
  • Each simulation directory needs to have the necessary input files and output directories
  • This file in the base directory, adjusted to match your setup and the desired simulation runs
    On Glob expressions, see Wikipedia Glob

 

pecube.sbatch

 

Once your preparations are done, you can log in on the cluster, go to your base directory and run the skript by typing

sbatch pecube.sbatch

and the skript will start running.

You can also run simulations in parallel, you just need to create a sbatch file for each run and launch from the terminal.